2025

DeepGEOSearch: LLM-Powered Schemaless Retrieval for Biomedical Data Discovery

Deepshikha Singh, Shashank Jatav, Shefali Lathwal, Arman Kazmi, Soumya Luthra · bioRxiv

Introduces a schema-less retrieval system that interprets dataset text, harmonizes terminology, and ranks GEO datasets against natural-language queries with evidence for each match. On a curated benchmark, it achieved more than 90% precision and its largest gains on complex, real-world searches.

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2025

Beyond the Hype: The Complexity of Automated Cell Type Annotations with GPT-4

Arman Kazmi, Deepshikha Singh, Shashank Jatav, Soumya Luthra · bioRxiv

Evaluates GPT-4 against traditional cell-type annotation methods across nine public single-cell RNA-seq datasets from diverse tissues. Literature-backed retrieval improved annotation quality and granularity, but ambiguous and less-characterized cell types remained difficult, showing that GPT-4 is not a universal solution.

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2022

Reducing Inference Time of Biomedical NER Tasks Using Multi-Task Learning

Mukund Chaudhry, Arman Kazmi, Shashank Jatav, Akhilesh Verma, Vishal Samal, Kristopher Paul, Ashutosh Modi · ICON

Proposes a multi-task learning framework that jointly learns three biomedical named-entity recognition tasks. The shared model reduced inference time by a factor of three without reducing prediction accuracy.

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2022

Linguistically Motivated Features for Classifying Shorter Text into Fiction and Non-Fiction Genre

Arman Kazmi, Sidharth Ranjan, Arpit Sharma, Rajakrishnan Rajkumar · COLING

Studies fiction and non-fiction classification for paragraph-length text using interpretable lexical, syntactic, and part-of-speech features. The feature-based model substantially improved over a simpler baseline, while BERT reached 97–98% accuracy and the interpretable model revealed measurable differences in lexical density, character diversity, and word order.

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College research

Selected projects from my BS–MS at IISER Bhopal.

MS thesis: Identifying Manipulative Writing Style from Shorter Texts

Studied syntactic and lexical signals in paragraph-length text. The work led to the COLING publication listed above.

Extracting Causality from Natural Language

Investigated rules based on dependency relations for extracting cause-and-effect pairs from English sentences.

BS thesis: POS Tags in Document-Level Genre Classification

Used Markov chains and part-of-speech transitions to study differences between fiction and non-fiction. Read the thesis ↗

Writing Style of News Articles

Studied sentiment and writing style in news, and built the backend for an application that categorized articles. View NewsChase ↗